Actions implemented in PLUMED
The actions that can be used within a PLUMED input file are listed below.
Name | Description |
---|---|
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
BASIS_FUNCTIONS | replace with proper description from syntax |
PERIODIC | replace with proper description from syntax |
NUMERICAL_INTEGRALS | replace with proper description from syntax |
SCALED | replace with proper description from syntax |
NUMERICAL_INTEGRALS | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
PHASES | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
PHASES | replace with proper description from syntax |
NOSTOP | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
COMPONENT | replace with proper description from syntax |
UPDATE_UNTIL | replace with proper description from syntax |
FMT | replace with proper description from syntax |
ORIGIN | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
UPDATE_UNTIL | replace with proper description from syntax |
LABEL | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
SCALED_COMPONENTS | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
COORDINATES | replace with proper description from syntax |
output | replace with proper description from syntax |
NDX_GROUP | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
FILE | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
WHOLE | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
MAKE_WHOLE | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
NOREPLICAS | replace with proper description from syntax |
output | replace with proper description from syntax |
UPDATE_UNTIL | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
SEED | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
TYPE | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
NORMALIZE | replace with proper description from syntax |
NORMALIZE | replace with proper description from syntax |
NORMALIZE | replace with proper description from syntax |
NORMALIZE | replace with proper description from syntax |
NORMALIZE | replace with proper description from syntax |
SIGMA | replace with proper description from syntax |
NORMALIZE | replace with proper description from syntax |
SHIFT_TO_ZERO | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
MORE_THAN | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
FES_PROJ_OUTPUT | replace with proper description from syntax |
output | replace with proper description from syntax |
FMT | replace with proper description from syntax |
PAIR | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
NUMERICAL_INTEGRALS | replace with proper description from syntax |
NUMERICAL_INTEGRALS | replace with proper description from syntax |
CHECK_NAN_INF | replace with proper description from syntax |
PERIODIC | replace with proper description from syntax |
NORMALIZATION | replace with proper description from syntax |
PERIODIC | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
COMPONENT | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
FILE | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
UPDATE_UNTIL | replace with proper description from syntax |
UPDATE_UNTIL | replace with proper description from syntax |
MAXCONNECT | replace with proper description from syntax |
ONLY_CHARGES | replace with proper description from syntax |
UPDATE_UNTIL | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
NOPBC | replace with proper description from syntax |
STRIDE | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
PRECISION | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
FILE | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
false | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
VALUE | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
FGRID_SIZE | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
NORMALIZE | replace with proper description from syntax |
SHIFT_TO_ZERO | replace with proper description from syntax |
NORMALIZE | replace with proper description from syntax |
NORMALIZE | replace with proper description from syntax |
SHIFT_TO_ZERO | replace with proper description from syntax |
SIGMA | replace with proper description from syntax |
SHIFT_TO_ZERO | replace with proper description from syntax |
SIGMA_MAXIMA | replace with proper description from syntax |
BIASFACTOR | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
NATURAL | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
NUMERICAL_DERIVATIVES | replace with proper description from syntax |
DO_1D_PROJECTIONS | replace with proper description from syntax |
BANDWIDTH | replace with proper description from syntax |
ADDREFERENCE | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |
output | replace with proper description from syntax |